CDS
| Accession Number | TCMCG006C03955 |
| gbkey | CDS |
| Protein Id | XP_022572685.1 |
| Location | complement(join(42861422..42863287,42863385..42863463,42863609..42863721,42863791..42863922,42864027..42864210,42864289..42864422,42864535..42864639,42865079..42865180,42865272..42865364,42865452..42865760,42865874..42865975,42866053..42866115,42866237..42866750,42866934..42867091,42867171..42867301,42874699..42875080,42875155..42875196,42875287..42875418,42875493..42875557,42875626..42875958,42876050..42876122,42876326..42876418,42876517..42876578,42876660..42876729)) |
| Gene | LOC106440974 |
| GeneID | 106440974 |
| Organism | Brassica napus |
Protein
| Length | 1778aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022716964.1 |
| Definition | protein TSS-like isoform X2 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Translation initiation factor eIF3 subunit 135 |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03012 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03255
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0001101
[VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009719 [VIEW IN EMBL-EBI] GO:0009725 [VIEW IN EMBL-EBI] GO:0009737 [VIEW IN EMBL-EBI] GO:0010033 [VIEW IN EMBL-EBI] GO:0033993 [VIEW IN EMBL-EBI] GO:0042221 [VIEW IN EMBL-EBI] GO:0050896 [VIEW IN EMBL-EBI] GO:0097305 [VIEW IN EMBL-EBI] GO:1901700 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCTCCTAAAGCTGGGAAAACAAAGCCACACAAGAGCAAAGGAGATAAGAAGAAGAAGGAAGAGAAAGTGTTGCCCACTGTCATAGAGATAAGTATTGAAACACCAGATGAATCCCAAGTGACTCTCAAGGGAATCTCCACGGACAGAATCTTAGATGTGAGGAAGCTCTTGGCGGCCCATGTTCAGACATGCCACTTCACCAACTTCTCACTCTCTCACCAGGTGCGTGGCACTAGGCTCAAGGACTCCGTTGACATCGTATCGCTCAAGCCCTGCCACCTCACCATCGTCGAAGAGGACTATACGGAGGAGCAAGCCACCGCGCACATACGGCGGCTCCTCGACATCGTCGCCTGCACCACCGCCTTCGGTTCGTCGAAACCGCCCGTACCTCGCACGTCTCCCAAGGAATCTGGTAACAAGGATGCCGGCGATTCAGATTCCGTTCTCAGCCCTAAGCTCAAGGAATCAGAGAAGAAACTCGTCGTCGGCAACGGCGGCGGGGGATGCGAGGCTTCTCAAGCTGCGGAAGGCGGAGACAAGGGCGAAATCAACATGTGCCCACCAACTCGTCTCGGGCAGTTTTACGAATTCTTCTCCTTCTCCCACTTGACTCCACCGATCCAATATATCAGGAGGTCTGTTCGTCCATCAATTGAAGATAAAGGATTAGATGATCTCTTTCAAATCGATGTTAAAGTTTCAAGTGGGAAGCCTATCACGGTTGTTGCGTCAAGAACAGGTTTTTACCCAGCTGGGAAACAGCAGCTTCTGTGTCATTCTTTAGTTGAGCTGCTGCAACAGATAAGCAGGCCTTTTGATGCTGCTTATGACGCTCTTATGAAAGCTTTCATTGAGCATAATAAATTTGCCAACCTTCCTTATGGTTTCCGGGCAAACACTTGGGTAGTTCCTCCGGTTGTTGCAGATAGCCCATCTACTTTTCCTTCACTTCCAGTGGAGGATGTGACATGGGGGGGAGATGGCGGTGGGGTTGGCCGGTCTGGTAAGCATGACAAGAGAAAGTGGGCCAAGGAGTTTGCGATTTTGGCAGCCATGCCTTGTAAAACATCTGAAGAGAGACAGGTTCGAGATAGGAAGGCCTTTCTACTCCACAGTCTATTCGTCGACGTTTCTGTTTTCAAAGCGGTGGAGATAATAAAGAATTTAGTAGAGAGTAATCAACTCTCGCCTGCGTTGGCTTTCCATGAACAAAGAGTAGGTGATTTGGTCATAAGGGTGGCTAGAGATGACCCTGATGCCAGTTCCAAGCTAGACCGAAAGAGTGATGGGACTCGGGTTCTAGAGATCTCTCAGGAAGAACTTGCTCAGAGAAATTTGCTTAAAGGGATCACTGCTGATGAGAGTGCGACGGTTCATGATACATCGACCTTGGGTGTGGTGGTTGTCAGACATTGTGGTTTCACAGCTATTGTGAAGGTTGCTGCTGAATTTAACTTGGATGTGGGCAGTCTCCCACTGGATATAGACATTGAAGACCAATCAGATGGAGGTGCAAATGCACTGAATGTAAATAGCTTGAGGACTCTGTTACACAAGTCGTCAACTCCTTCCAGCATAGCTCAGAGATCACCAAATGCAGACTCAGAACAAATACGTGTGGTTAAGTCCCTTGTGAGGAAAGTATTTGAGGACAGTCTGCAGAAATTGGAAGCTGAGCCCTCAAGGAATACCAAGCCTATAAGGTGGGAATTAGGAGCTTGTTGGGTGCAACATCTGCAAAATCAAGCTTCAAACAAAACTGATTCTAAGAACACTGAAGATGCTAAGCCTGAACCACCTGTTAAGGGTCTTGGAAAGCAAGGTGGACTTCTAAAGGAGATTAAAAAGAAGATTGATGTGAAAGCTAACAAGTCTGAACAGGGCAAGGATGCCCTTGCTAATACCGTTGACAATGACAATAAATCAGAAACTGAGGATCAGAAGGAACTCGAGAAACAAAATGAGGAGATGGAAAAGATGTGGAAAGAATTAGTGACAGAAGCTGCATATCAGCGTCTTAAAGAATCAGAAACTGGTTTTCATCTCAAGTCACCAAGAGAGCTGATTGAGATGTCCCGCAAATACTACACTGACACCGCTCTTCCGAAACTGGTGGCAGACTTTGGATCTCTTGAACTCTCACCCGTCGATGGGAGAACTCTGACTGACTTTATGCACACCAGAGGCTTACAGATGCATTCCTTGGGGAGAGTGGTCGAGCTGGCTGACAAGCTCCCTCATGTGCAATCCCTTTGTATCCATGAAATGATTGTTCGAGCATACAAGCATATACTGCAGGCTGTTGTAGCAGCTGTTGAAAACGCTGCTGATCTAGCCATCTCAATAGCAACATGCTTAAATGTCCTATTGGGAACACCGTCTGACACTGAGAGCGAATACGACGAAAAGATAAAGTGGACCTGGGTAGAAACTTTCATTTCCAAGAGATATGGGTGGGATTGGAAGCATGAAGGTTGCCAGGAATTGAGAAAATTCTCCATTCTTAGGGGACTGTCACACAAGGTTGGACTGGAGCTTGTTCCTAAAGACTATGAGATGGACACATCATGTCCATTCAAGAAGTTGGATATTATCAGTATGGTTCCTGTATATAAGCATGTTGCATGTTCATCCGCTGATGGACGTACTTTGTTGGAGTCATCCAAAACTTCCTTGGATAAAGGAAAACTAGAGGATGCTGTCAGTTATGGTACCAAGGCATTGACGAAGCTTGTAGCAGTGTGCGGCCCATATCATAGAATGACCGCCGGAGCATATAGTCTACTTGCTGTTGTGCTTTACCATACTGGGGACTTTAACCAGGCTACCATTTATCAGCAGAAAGCACTCGACATAAATGAAAGGGAGCTTGGACTTGATCATCCAGACACAATGAAAAGCTACGGCGACCTGGCCGTCTTCTATTATCGTCTCCAGCACACAGAATTAGCTTTAAAATATGTCAACCGTGCATTGTACCTTCTGCATCTAACATGTGGACCGTCACATCCAAATACTGCTGCCACTTATATTAATGTAGCGATGATGGAAGAAGGTTTGGGGAATGTCCATGTGGCTTTAAGATACCTTCATGAAGCGTTGAAATGTAACCAGAGACTACTTGGAGCTGATCATATCCAGACTGCTGCAAGCTACCATGCCATTGCTATTGCTCTTTCTCTGATGGAAGCATACTCCTTGAGCGTCCAGCATGAGCAGACAACTCTACAGATTCTACAGGCAAAACTTGGCCCTGAGGATCTTCGGACACAGGATGCGGCTGCGTGGCTCGAGTATTTTGAGTCTAAAGCTCTGGAACAGCAAGAAGCTGCACGAAATGGTACTCCCAAGCCAGACGCCTCTATTTCCAGCAAAGGCCATCTCAGTGTATCGGACCTGCTAGATTATATAACCCCGGATACTGATCTTAAAGCAAGGGACGCTCAAAGGAAAGCTCGCCTAAAGGTCAAGGGAAGACCAGGACAAAGTCCAGGACCTGTGTCTGAAGATAATCAGAAAGATGATGAAATTCTGAGTCCGACTAGTATCACTGGGGAGAGCTCAAGTGACAAGGAGAACAAATCAGATGCAAAACCTGAAGAAACAAAGGTTGATAAACTTGATTTGCAACCTCAAGATCAGCTGACGCTGGTTAAGCTAGAGTCCACGGCACAAGTGGATGATGACTCTGACGAAGGATGGCAAGAAGCTGTCCCAAAAAATCGTCATCCTTCTGGGCGAAGAACCCGTCCCAGCCTGGCAAAGCTGAACACAAACTTCATGAACGTGACCCAGCAGACAACAAAAAGCAGAGGAAAATCCACTAACTTCGCATCCCCAAGGACTAATTCAAATGAGCTTACAATTTCTGCTGGTGGTTCTACTTCCCAGCACGCGAAGAAGCTTTTGAAGAGCTCAAGTTTGAACAGAAAGCAAAACAGTTCCAATATAGTGGGAGAAAAGCCAGTTAACAATAAATCACCCTTAGCAAGCTCACCTTCCACCGAACAGATCAACAAGCCAACTCTGATGGTGAGTCCTGTGACTCCACAAGCTGGAAAACTGTTTTCCTATAAGGAAGTTGCACTGGCACCCCCTGGAACAATTGTGAAAATAGTTGCGGAGCAGTTGCCAGAAGAAACGACTGCTCCAGAGACTTTGGATGCAGCAAAAGTCGCAGTAGATGGTCCTGAAAAAGTTAACGGTGAGGATGTTGTTAGTGAGAATAAGCATGTGACTACAGAAACTGAAGCAAAAAATGCTGATAGCAATGAACAAGGAGGGGTGGCTGTTGGTGGATCAGAGTCGATGAGTTCACCAGAGGATATCAAGGCTGAAAAGGCAGCAGCAGAAGGATCTCCAACAGAGACAGCTGTTTCAGATGCAAGTCAAGGAAAATCAGAAAGTGTACAAACGGCTGAGGACTCAAATGGAGTGAAGCAACATAAGGATGTCTCTGGTACTGAACTGAAAGCAGTAGATGGTGAAACGGAAGATCTGCCCAATGGAGACTCAAGCCCAAAGACATCAGTAGTTGCAGATGGAGAAAAGCAAGAAGCATGCGAGGCACAAAAGGAGATGAGCAAGAAGCTCTCTGCTTCGGCACCGCCCTATACCCCAACGACCATTCCAATTTTTGGGTCGATAGCAGTTCCAGGATTCAACGACCACGTGGGAATCCTTCCCTCCCCATTGAACATACCGCCAATGCTTCCTGTAAACCATGTCCGGAGGTCAACTCCTCATCAGTCTGTAACAGCTCGAGTTCCATATGGGCCTAGGCTCTCAGGTGGTGGTTACAACCGATCTGGAAACAGGGTTCCTCGCAACAAACCAAGCTTCCCCATTATCGCTGAGTCCAATGGCGATGCTAATCAATTCATTGGCCCAAGGATAATGAACCCTCACGCGGCTGAGTTCATACCGAGTCAACCATGGGTTTCTAATGGTTATCCAGTGTCACCAAACGGATATTTGGCATCACCAAATGGGACGGAAATAACACAGAATGGGTACCCGTTGTCGCCAGTAGCAGAAGGTGCATATCCGTGTAACATACCTGTACAGCCTCAGAATGGGCATACACCAGTGGCTTTGGAGGGATTACCTGGTACTGAAATGGCTGAGGAGAAGAGTGGAGGTGAAGAAGAGAGCAACAAGGAGAAGAAAGGTGCAGAGGATGAAGAAGTCATTGCACAAGAAACACCTGAAAATGGACACTCGACAGAAGGTGAAGAGAAAACCACAGCACAAGAGATATCTAATGGGAAAGGACAAGGAGGCAAGTGCTGGGGAGATTACAGCGACAATGAAATTGAAGTCACAAATTGA |
| Protein: MAPKAGKTKPHKSKGDKKKKEEKVLPTVIEISIETPDESQVTLKGISTDRILDVRKLLAAHVQTCHFTNFSLSHQVRGTRLKDSVDIVSLKPCHLTIVEEDYTEEQATAHIRRLLDIVACTTAFGSSKPPVPRTSPKESGNKDAGDSDSVLSPKLKESEKKLVVGNGGGGCEASQAAEGGDKGEINMCPPTRLGQFYEFFSFSHLTPPIQYIRRSVRPSIEDKGLDDLFQIDVKVSSGKPITVVASRTGFYPAGKQQLLCHSLVELLQQISRPFDAAYDALMKAFIEHNKFANLPYGFRANTWVVPPVVADSPSTFPSLPVEDVTWGGDGGGVGRSGKHDKRKWAKEFAILAAMPCKTSEERQVRDRKAFLLHSLFVDVSVFKAVEIIKNLVESNQLSPALAFHEQRVGDLVIRVARDDPDASSKLDRKSDGTRVLEISQEELAQRNLLKGITADESATVHDTSTLGVVVVRHCGFTAIVKVAAEFNLDVGSLPLDIDIEDQSDGGANALNVNSLRTLLHKSSTPSSIAQRSPNADSEQIRVVKSLVRKVFEDSLQKLEAEPSRNTKPIRWELGACWVQHLQNQASNKTDSKNTEDAKPEPPVKGLGKQGGLLKEIKKKIDVKANKSEQGKDALANTVDNDNKSETEDQKELEKQNEEMEKMWKELVTEAAYQRLKESETGFHLKSPRELIEMSRKYYTDTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMHSLGRVVELADKLPHVQSLCIHEMIVRAYKHILQAVVAAVENAADLAISIATCLNVLLGTPSDTESEYDEKIKWTWVETFISKRYGWDWKHEGCQELRKFSILRGLSHKVGLELVPKDYEMDTSCPFKKLDIISMVPVYKHVACSSADGRTLLESSKTSLDKGKLEDAVSYGTKALTKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGPEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLLDYITPDTDLKARDAQRKARLKVKGRPGQSPGPVSEDNQKDDEILSPTSITGESSSDKENKSDAKPEETKVDKLDLQPQDQLTLVKLESTAQVDDDSDEGWQEAVPKNRHPSGRRTRPSLAKLNTNFMNVTQQTTKSRGKSTNFASPRTNSNELTISAGGSTSQHAKKLLKSSSLNRKQNSSNIVGEKPVNNKSPLASSPSTEQINKPTLMVSPVTPQAGKLFSYKEVALAPPGTIVKIVAEQLPEETTAPETLDAAKVAVDGPEKVNGEDVVSENKHVTTETEAKNADSNEQGGVAVGGSESMSSPEDIKAEKAAAEGSPTETAVSDASQGKSESVQTAEDSNGVKQHKDVSGTELKAVDGETEDLPNGDSSPKTSVVADGEKQEACEAQKEMSKKLSASAPPYTPTTIPIFGSIAVPGFNDHVGILPSPLNIPPMLPVNHVRRSTPHQSVTARVPYGPRLSGGGYNRSGNRVPRNKPSFPIIAESNGDANQFIGPRIMNPHAAEFIPSQPWVSNGYPVSPNGYLASPNGTEITQNGYPLSPVAEGAYPCNIPVQPQNGHTPVALEGLPGTEMAEEKSGGEEESNKEKKGAEDEEVIAQETPENGHSTEGEEKTTAQEISNGKGQGGKCWGDYSDNEIEVTN |